{
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  "Package": "rcaiman",
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  "Title": "CAnopy IMage ANalysis",
  "Version": "2.1.3.9000",
  "Date": "2025-09-01",
  "Authors@R": "person(\"Gastón Mauro\", \"Díaz\", , \"gastonmaurodiaz@gmail.com\",\nrole = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-0362-8616\"))",
  "Description": "Tools for preprocessing and analysis of canopy\nphotographs.",
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  "Repository": "https://gastonmaurodiaz.r-universe.dev",
  "Date/Publication": "2026-02-11 21:15:23 UTC",
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  "Author": "Gastón Mauro Díaz [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-0362-8616>)",
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  "_exports": [
    "apply_by_direction",
    "apply_locally",
    "assess_sampling_uniformity",
    "azimuth_image",
    "binarize_by_region",
    "binarize_with_thr",
    "calc_diameter",
    "calc_relative_radius",
    "calc_spherical_distance",
    "calc_zenith_colrow",
    "calibrate_lens",
    "chessboard",
    "cie_image",
    "complementary_gradients",
    "compute_canopy_openness",
    "conventional_lens_image",
    "correct_vignetting",
    "correct_vignetting_legacy",
    "crop_caim",
    "crosscalibrate_lens",
    "defuzzify",
    "display_caim",
    "equalarea_segmentation",
    "estimate_sun_angles",
    "expand_noncircular",
    "extract_cv",
    "extract_dn",
    "extract_feature",
    "extract_radiometry",
    "extract_rr",
    "fibonacci_points",
    "fisheye_to_equidistant",
    "fisheye_to_pano",
    "fit_cie_model",
    "fit_coneshaped_model",
    "fit_trend_surface",
    "grow_black",
    "hsp_read_manual_input",
    "hsp_read_opt_sky_coef",
    "hsp_write_sky_points",
    "hsp_write_sun_coord",
    "interpolate_planar",
    "interpolate_spherical",
    "invert_gamma_correction",
    "is_outlier",
    "lens",
    "normalize_minmax",
    "ootb_sky_cie",
    "optim_sun_angles",
    "optimize_sampling_uniformity",
    "paint_with_mask",
    "polar_qtree",
    "read_bin",
    "read_caim",
    "read_caim_raw",
    "read_sky_cie",
    "rem_isolated_black_pixels",
    "rem_nearby_points",
    "rem_outliers",
    "rem_small_gaps",
    "ring_segmentation",
    "row_col_from_zenith_azimuth",
    "sample_sky_points",
    "sector_segmentation",
    "select_sky_region",
    "set_rcaiman_geometry",
    "skygrid_centers",
    "skygrid_segmentation",
    "test_lens_coef",
    "thr_isodata",
    "thr_mblt",
    "thr_twocorner",
    "triangulate",
    "tune_sky_sampling",
    "validate_cie_model",
    "write_bin",
    "write_caim",
    "write_sky_cie",
    "zenith_azimuth_from_row_col",
    "zenith_image"
  ],
  "_datasets": [
    {
      "name": "cie_table",
      "title": "Set of 15 CIE Standard Skies",
      "object": "cie_table",
      "class": [
        "data.frame"
      ],
      "fields": [
        "a",
        "b",
        "c",
        "d",
        "e",
        "indicatrix_group",
        "general_sky_type",
        "description"
      ],
      "rows": 15,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "apply_by_direction",
      "title": "Apply a method by direction using a constant field of view",
      "topics": [
        "apply_by_direction"
      ]
    },
    {
      "page": "apply_locally",
      "title": "Apply a function locally using sampled points on the hemispherical domain",
      "topics": [
        "apply_locally"
      ]
    },
    {
      "page": "assess_sampling_uniformity",
      "title": "Assess sampling uniformity",
      "topics": [
        "assess_sampling_uniformity"
      ]
    },
    {
      "page": "azimuth_image",
      "title": "Build azimuth image",
      "topics": [
        "azimuth_image"
      ]
    },
    {
      "page": "binarize_by_region",
      "title": "Regional thresholding of greyscale images",
      "topics": [
        "binarize_by_region"
      ]
    },
    {
      "page": "binarize_with_thr",
      "title": "Binarize with known thresholds",
      "topics": [
        "binarize_with_thr"
      ]
    },
    {
      "page": "calc_diameter",
      "title": "Calculate diameter",
      "topics": [
        "calc_diameter"
      ]
    },
    {
      "page": "calc_relative_radius",
      "title": "Calculate relative radius",
      "topics": [
        "calc_relative_radius"
      ]
    },
    {
      "page": "calc_spherical_distance",
      "title": "Calculate spherical distance",
      "topics": [
        "calc_spherical_distance"
      ]
    },
    {
      "page": "calc_zenith_colrow",
      "title": "Calculate zenith raster coordinates",
      "topics": [
        "calc_zenith_colrow"
      ]
    },
    {
      "page": "calibrate_lens",
      "title": "Calibrate lens",
      "topics": [
        "calibrate_lens"
      ]
    },
    {
      "page": "chessboard",
      "title": "Perform chessboard segmentation",
      "topics": [
        "chessboard"
      ]
    },
    {
      "page": "cie_image",
      "title": "CIE sky image",
      "topics": [
        "cie_image"
      ]
    },
    {
      "page": "cie_table",
      "title": "Set of 15 CIE Standard Skies",
      "topics": [
        "cie_table"
      ]
    },
    {
      "page": "complementary_gradients",
      "title": "Calculate complementary gradients",
      "topics": [
        "complementary_gradients"
      ]
    },
    {
      "page": "compute_canopy_openness",
      "title": "Calculate canopy openness",
      "topics": [
        "compute_canopy_openness"
      ]
    },
    {
      "page": "conventional_lens_image",
      "title": "Generate conventional-lens-like image",
      "topics": [
        "conventional_lens_image"
      ]
    },
    {
      "page": "correct_vignetting",
      "title": "Correct vignetting effect",
      "topics": [
        "correct_vignetting"
      ]
    },
    {
      "page": "correct_vignetting_legacy",
      "title": "Correct vignetting using legacy calibration model",
      "topics": [
        "correct_vignetting_legacy"
      ]
    },
    {
      "page": "crop_caim",
      "title": "Crop a canopy image",
      "topics": [
        "crop_caim"
      ]
    },
    {
      "page": "crosscalibrate_lens",
      "title": "Cross-calibrate lens",
      "topics": [
        "crosscalibrate_lens"
      ]
    },
    {
      "page": "defuzzify",
      "title": "Defuzzify a fuzzy classification",
      "topics": [
        "defuzzify"
      ]
    },
    {
      "page": "display_caim",
      "title": "Display a canopy image",
      "topics": [
        "display_caim"
      ]
    },
    {
      "page": "equalarea_segmentation",
      "title": "Segment a hemisphere into equal-area cells in spherical space",
      "topics": [
        "equalarea_segmentation"
      ]
    },
    {
      "page": "estimate_sun_angles",
      "title": "Estimate sun angular coordinates",
      "topics": [
        "estimate_sun_angles"
      ]
    },
    {
      "page": "expand_noncircular",
      "title": "Expand non-circular",
      "topics": [
        "expand_noncircular"
      ]
    },
    {
      "page": "extract_cv",
      "title": "Extract local CV from sky points",
      "topics": [
        "extract_cv"
      ]
    },
    {
      "page": "extract_dn",
      "title": "Extract digital numbers from image with sampling points",
      "topics": [
        "extract_dn"
      ]
    },
    {
      "page": "extract_feature",
      "title": "Extract feature",
      "topics": [
        "extract_feature"
      ]
    },
    {
      "page": "extract_radiometry",
      "title": "Extract radiometry data for calibration",
      "topics": [
        "extract_radiometry"
      ]
    },
    {
      "page": "extract_rr",
      "title": "Extract digital numbers at sky points and normalize by estimated zenith radiance",
      "topics": [
        "extract_rr"
      ]
    },
    {
      "page": "fibonacci_points",
      "title": "Map Fibonacci points to raster coordinates",
      "topics": [
        "fibonacci_points"
      ]
    },
    {
      "page": "fisheye_to_equidistant",
      "title": "Fisheye to equidistant",
      "topics": [
        "fisheye_to_equidistant"
      ]
    },
    {
      "page": "fisheye_to_pano",
      "title": "Fisheye to panoramic",
      "topics": [
        "fisheye_to_pano"
      ]
    },
    {
      "page": "fit_cie_model",
      "title": "Fit CIE sky model",
      "topics": [
        "fit_cie_model"
      ]
    },
    {
      "page": "fit_coneshaped_model",
      "title": "Fit cone-shaped model",
      "topics": [
        "fit_coneshaped_model"
      ]
    },
    {
      "page": "fit_trend_surface",
      "title": "Fit a trend surface to sky digital numbers",
      "topics": [
        "fit_trend_surface"
      ]
    },
    {
      "page": "grow_black",
      "title": "Grow black regions in a binary mask",
      "topics": [
        "grow_black"
      ]
    },
    {
      "page": "hsp_compat",
      "title": "HSP compatibility functions",
      "topics": [
        "hsp_compat",
        "hsp_read_manual_input",
        "hsp_read_opt_sky_coef",
        "hsp_write_sky_points",
        "hsp_write_sun_coord"
      ]
    },
    {
      "page": "interpolate_planar",
      "title": "Interpolate in planar space",
      "topics": [
        "interpolate_planar"
      ]
    },
    {
      "page": "interpolate_spherical",
      "title": "Interpolate in spherical space",
      "topics": [
        "interpolate_spherical"
      ]
    },
    {
      "page": "invert_gamma_correction",
      "title": "Gamma back correction of JPEG images",
      "topics": [
        "invert_gamma_correction"
      ]
    },
    {
      "page": "is_outlier",
      "title": "Identify statistical outliers",
      "topics": [
        "is_outlier"
      ]
    },
    {
      "page": "lens",
      "title": "Access the lens database",
      "topics": [
        "lens"
      ]
    },
    {
      "page": "normalize_minmax",
      "title": "Normalize data using min-max rescaling",
      "topics": [
        "normalize_minmax"
      ]
    },
    {
      "page": "ootb_bin",
      "title": "Out-of-the-box reliable binarized image",
      "topics": [
        "ootb_bin"
      ]
    },
    {
      "page": "ootb_cie_model",
      "title": "Out-of-the-box CIE sky model",
      "topics": [
        "ootb_cie_model"
      ]
    },
    {
      "page": "ootb_sky_above",
      "title": "Out-of-the-box above-canopy sky",
      "topics": [
        "ootb_sky_above"
      ]
    },
    {
      "page": "ootb_sky_cie",
      "title": "Out-of-the-box CIE sky model and raster",
      "topics": [
        "ootb_sky_cie"
      ]
    },
    {
      "page": "optim_sun_angles",
      "title": "Optimize sun angular coordinates",
      "topics": [
        "optim_sun_angles"
      ]
    },
    {
      "page": "optimize_sampling_uniformity",
      "title": "Optimize the minimum distance between sky sampling points",
      "topics": [
        "optimize_sampling_uniformity"
      ]
    },
    {
      "page": "paint_with_mask",
      "title": "Paint with mask",
      "topics": [
        "paint_with_mask"
      ]
    },
    {
      "page": "polar_qtree",
      "title": "Generate polar quadtree segmentation",
      "topics": [
        "polar_qtree"
      ]
    },
    {
      "page": "read_bin",
      "title": "Write and read binarized images",
      "topics": [
        "read_bin",
        "write_bin"
      ]
    },
    {
      "page": "read_caim",
      "title": "Read a canopy image from a file",
      "topics": [
        "read_caim"
      ]
    },
    {
      "page": "read_caim_raw",
      "title": "Read a canopy image from a raw file",
      "topics": [
        "read_caim_raw"
      ]
    },
    {
      "page": "rem_isolated_black_pixels",
      "title": "Remove isolated black pixels",
      "topics": [
        "rem_isolated_black_pixels"
      ]
    },
    {
      "page": "rem_nearby_points",
      "title": "Remove nearby sky points",
      "topics": [
        "rem_nearby_points"
      ]
    },
    {
      "page": "rem_outliers",
      "title": "Remove statistical outliers in sky points",
      "topics": [
        "rem_outliers"
      ]
    },
    {
      "page": "rem_small_gaps",
      "title": "Remove small gaps",
      "topics": [
        "rem_small_gaps"
      ]
    },
    {
      "page": "ring_segmentation",
      "title": "Assign zenith-ring labels",
      "topics": [
        "ring_segmentation"
      ]
    },
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